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<td align=left><a href="../summary.html">Return to main results</a></td>
<td align=right>Retrieve Phyre Job Id <input type="text" SIZE=30 NAME="jobid"><input type="submit" value="Fetch" name="fetch"></font>
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<td><table class="midshade"><tr><td class="darkshade" style="width:12em;">Job Description</td><td colspan=3>Ice2_____</td></tr><tr><td class="darkshade">Confidence</td><td>19.03%</td><td class="darkshade">Date</td><td>Fri Feb 12 18:45:40 GMT 2021</td></tr>
<tr><td class="darkshade">Rank</td><td>15</td><td class="darkshade">Aligned Residues</td><td>25</td></tr>
<tr><td class="darkshade">% Identity</td><td>16%</td><td class="darkshade">Template</td><td>c6pnjL_</td></tr>
<tr><td class="darkshade">PDB info</td>
<td><b>PDB header:</b>photosynthesis</td><td><b>Chain: </b>L: <b>PDB Molecule:</b>photosystem i reaction center protein subunit xi;</td><td>
<b>PDBTitle:</b> structure of photosystem i acclimated to far-red light
</td></tr>
<tr><td class="darkshade">Resolution</td><td colspan=3>3.20 &#8491</td></tr>
<tr><td class="darkshade">Model Dimensions (&#8491;)</td><td colspan=3><b>X</b>:13.198 <b>Y</b>:38.519 <b>Z</b>:15.603
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<table border=0><tr><td bgcolor=darkred>&nbsp;&nbsp</td><td>Insertion relative to template</td>
<tr><td bgcolor=orange>&nbsp;&nbsp</td><td>Deletion relative to template</td></tr>
<tr><td style="border-style:solid; border-width:thick; border-color:red;">&nbsp;&nbsp</td><td>Catalytic residue from the <a href="http://www.ebi.ac.uk/thornton-srv/databases/CSA/">CSA</a></td></tr>
<tr><td colspan=2>&nbsp</td></tr>
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<tr>
<td style="width:100px;">&nbsp</td><td>&nbsp</td>
<td class="index">221</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">230</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">240</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td></tr>
<tr>
<td class="darkshade">Predicted Secondary structure</td><td>&nbsp</td>
<td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td></tr>
<tr confidence=1 style="display:none;">
<td class="darkshade">Query SS confidence</td><td>&nbsp</td>
<td><hr color="#f1d532" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#b7db48" size=4></td></tr>
<tr>
<td class="midshadess">Query Sequence</td><td>&nbsp</td>
<td style="color:ff6600;">S</td><td style="color:009900;">L</td><td style="color:009900;">L</td><td style="color:ff6600;">G</td><td style="color:009900;">L</td><td style="color:009900;">V</td><td style="color:009900;">L</td><td style="color:ff6600; background-color:#d2d0c1">S</td><td style="color:009900;">M</td><td style="color:009900;">V</td><td style="color:6600CC;">C</td><td style="color:ff6600; background-color:#d2d0c1">G</td><td style="color:009900;">L</td><td style="color:ff6600;">G</td><td style="color:009900;">L</td><td style="color:0000cc;">Y</td><td style="color:ff6600;">G</td><td style="color:009900; background-color:#d2d0c1">I</td><td style="color:009900;">V</td><td style="color:ff6600;">S</td><td style="color:990000;">Q</td><td style="color:990000;">K</td><td style="color:ff6600; background-color:#d2d0c1">G</td><td style="color:ff6600;">S</td><td style="color:009900;">V</td></tr>
<tr consqual=1 style="display:none">
<td class="darkshade">Query Conservation</td><td>&nbsp</td>
<td><hr color=#737065 size=4></td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=10></td><td>&nbsp</td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=10></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=10></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td>&nbsp</td></tr>
<tr consqual=1 style="display:none">
<td class="midshadess">Alig confidence</td><td>&nbsp</td>
<td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td></tr>
<tr consqual=1 style="display:none">
<td class="darkshade">Template Conservation</td><td>&nbsp</td>
<td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td></tr>
<tr>
<td class="midshadess">Template Sequence</td><td>&nbsp</td>
<td style="color:ff6600;">T</td><td style="color:ff6600;">A</td><td style="color:009900;">I</td><td style="color:0000cc;">Y</td><td style="color:009900;">I</td><td style="color:ff6600;">A</td><td style="color:009900;">V</td><td style="color:ff6600; background-color:#d2d0c1">S</td><td style="color:ff6600;">A</td><td style="color:6600CC;">C</td><td style="color:009900;">L</td><td style="color:ff6600; background-color:#d2d0c1">G</td><td style="color:009900;">I</td><td style="color:ff6600;">S</td><td style="color:009900;">I</td><td style="color:0000cc;">F</td><td style="color:ff6600;">A</td><td style="color:009900; background-color:#d2d0c1">I</td><td style="color:ff6600;">T</td><td style="color:ff6600;">T</td><td style="color:0000cc;">F</td><td style="color:990000;">Q</td><td style="color:ff6600; background-color:#d2d0c1">G</td><td style="color:990000;">N</td><td style="color:ff6600;">P</td></tr>
<tr>
<td nowrap class="darkshade">Template Known Secondary structure</td><td>&nbsp</td>
<td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td><td>S</td><td>S</td><td><hr></td><td>S</td></tr>
<tr>
<td class="midshadess">Template Predicted Secondary structure</td><td>&nbsp</td>
<td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td></tr>
<tr confidence=1 style="display:none">
<td class="darkshade">Template SS confidence</td><td>&nbsp</td>
<td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#76c0d1" size=4></td><td><hr color="#6f6da5" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td></tr>
<tr>
<td style="width:100px;">&nbsp</td><td>&nbsp</td>
<td class="index">90</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">100</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">110</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td></tr>
<tr><td>&nbsp</td></tr>
</table>
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<td style="width:7em;" class="darkshadelalig">Download:</td><td class="midshade"><a href="c6pnjL_.15.alig.txt">Text version</a></td>
<td class="midshade"><a href="../c6pnjL_.15.fasta">FASTA pairwise alignment</a></td>
<td class="midshade"><a href="../c6pnjL_.15.pdb">3D Model in PDB format</a></td></tr></table>
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<tr align=center><td colspan=3><font size=-1><b>Please cite:</b> The Phyre2 web portal for protein modeling, prediction and analysis</font></td></tr> 

<tr align=center><td colspan=3><font size=-1>Kelley LA <i>et al.</i> <i>Nature Protocols</i>
10, 845-858 (2015)
      [<a href="http://www.nature.com/nprot/journal/v10/n6/full/nprot.2015.053.html">paper</a>]
      [<a href="http://www.nature.com/nprot/journal/v10/n6/ris/nprot.2015.053.ris">Citation
	link</a>]</font></td></tr> 
<tr><td colspan=3>&nbsp</td></tr>
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<table border=0> 

<tr><td><font size=-2>&copy <a href="http://www.sbg.bio.ic.ac.uk">Structural Bioinformatics Group</a>, Imperial College, London</td></tr> 

<tr><td><font size=-2><a
href="http://www.sbg.bio.ic.ac.uk/people/kelley/kelley.html">Lawrence
Kelley</a>, <a href="http://www.imperial.ac.uk/people/m.sternberg">Michael Sternberg</a></td><td>&nbsp</td></tr> 
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<tr><td><img alt="BBSRC logo" src="http://www.sbg.bio.ic.ac.uk/phyre2/html/images/bbsrc.gif"><br>Phyre2 is part of <b><a href="http://genome3d.eu/">Genome3D</a></b></td></tr>
</table></td></tr>
</table> 
<br><br>
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